Monkeypox-related datasets

The latest outbreak of monkeypox has now become a source of concern for healthcare professionals throughout the world. It is essential to have an early diagnosis in order to slow down its rapid progression. For this purpose, we have created a new skin image-based dataset for the detection of monkeypox disease. This dataset consists of four classes: Monkeypox, Chickenpox, Measles, and Normal. All the image classes are collected from internet-based health website sources. The entire dataset has been developed by the Department of Computer Science and Engineering, Islamic University, Kushtia-7003, Bangladesh.

Monkeypox: Cutaneous Clues to Clinical Diagnosis

Please cite the following paper when using this dataset: N. Thakur, “MonkeyPox2022Tweets: The first public Twitter dataset on the 2022 MonkeyPox outbreak,” Preprints, 2022, DOI: 10.20944/preprints202206.0172.v2 Abstract The world is currently facing an outbreak of the monkeypox virus, and confirmed cases have been reported from 28 countries. Following a recent “emergency meeting”, the World Health Organization just declared monkeypox a global health emergency. As a result, people from all over the world are using social media platforms, such as Twitter, for information seeking and sharing related to the outbreak, as well as for familiarizing themselves with the guidelines and protocols that are being recommended by various policy-making bodies to reduce the spread of the virus. This is resulting in the generation of tremendous amounts of Big Data related to such paradigms of social media behavior. Mining this Big Data and compiling it in the form of a dataset can serve a wide range of use-cases and applications such as analysis of public opinions, interests, views, perspectives, attitudes, and sentiment towards this outbreak. Therefore, this work presents MonkeyPox2022Tweets, an open-access dataset of Tweets related to the 2022 monkeypox outbreak that were posted on Twitter since the first detected case of this outbreak on May 7, 2022. The dataset is compliant with the privacy policy, developer agreement, and guidelines for content redistribution of Twitter, as well as with the FAIR principles (Findability, Accessibility, Interoperability, and Reusability) principles for scientific data management. Data Description The dataset consists of a total of 255,363 Tweet IDs of the same number of tweets about monkeypox that were posted on Twitter from 7th May 2022 to 23rd July 2022 (the most recent date at the time of dataset upload). The Tweet IDs are presented in 6 different .txt files based on the timelines of the associated tweets. The following provides the details of these dataset files. • Filename: TweetIDs_Part1.txt (No. of Tweet IDs: 13926, Date Range of the Tweet IDs: May 7, 2022 to May 21, 2022) • Filename: TweetIDs_Part2.txt (No. of Tweet IDs: 17705, Date Range of the Tweet IDs: May 21, 2022 to May 27, 2022) • Filename: TweetIDs_Part3.txt (No. of Tweet IDs: 17585, Date Range of the Tweet IDs: May 27, 2022 to June 5, 2022) • Filename: TweetIDs_Part4.txt (No. of Tweet IDs: 19718, Date Range of the Tweet IDs: June 5, 2022 to June 11, 2022) • Filename: TweetIDs_Part5.txt (No. of Tweet IDs: 47718, Date Range of the Tweet IDs: June 12, 2022 to June 30, 2022) • Filename: TweetIDs_Part6.txt (No. of Tweet IDs: 138711, Date Range of the Tweet IDs: July 1, 2022 to July 23, 2022) The dataset contains only Tweet IDs in compliance with the terms and conditions mentioned in the privacy policy, developer agreement, and guidelines for content redistribution of Twitter. The Tweet IDs need to be hydrated to be used.

The research and publication dataset of the COVID-19 pandemic in Indonesia, which was indexed by Scopus in 2020. The dataset contains data authors, authors ID Scopus, title, year, source title, volume, issue, article number in Scopus, DOI, link, affiliation, abstract, index keywords, references, correspondence Address, editors, publisher, conference name, conference date, conference code, ISSN, language, document type, access type, and EID.

Raw sequencing data from HLA-A2 transgenic mice before and after infection with either the ACAM2000 smallpox virus or highly releated monkeypox virus.

Code and data for the paper: "Monkeypox in Latin America and the Caribbean: First response and challenge ahead after the first 100 days of the 2022 outbreak" (Paper authors: Antonio Quispe & Jesus M. Castagnetto) This release contains the code in R and the data used to generate the figures and table, using as sources the data from UN World Population Prospects, the World Bank country classification and the Monkeypox data from the Global Health Data Science Inititative (data donwloaded on 2022-08-31) Analysis, figures and table consider data from non-endemic countries from epidemiological week 2022W20 to 2022W34 (inclusive)

Warchoł, Konrad, Jasiura, Adam, Giżewska, Kamila, Wójcik, Aleksandra, Niedobylski, Sylwiusz. Monkeypox in humans – the review. Journal of Education, Health and Sport. 2022;12(9):33-40. eISSN 2391-8306. DOI http://dx.doi.org/10.12775/JEHS.2022.12.09.004 https://apcz.umk.pl/JEHS/article/view/JEHS.2022.12.09.004 https://zenodo.org/record/7026337 The journal has had 40 points in Ministry of Education and Science of Poland parametric evaluation. Annex to the announcement of the Minister of Education and Science of December 21, 2021. No. 32343. Has a Journal's Unique Identifier: 201159. Scientific disciplines assigned: Physical Culture Sciences (Field of Medical sciences and health sciences); Health Sciences (Field of Medical Sciences and Health Sciences). Punkty Ministerialne z 2019 - aktualny rok 40 punktów. Załącznik do komunikatu Ministra Edukacji i Nauki z dnia 21 grudnia 2021 r. Lp. 32343. Posiada Unikatowy Identyfikator Czasopisma: 201159. Przypisane dyscypliny naukowe: Nauki o kulturze fizycznej (Dziedzina nauk medycznych i nauk o zdrowiu); Nauki o zdrowiu (Dziedzina nauk medycznych i nauk o zdrowiu). © The Authors 2022; This article is published with open access at Licensee Open Journal Systems of Nicolaus Copernicus University in Torun, Poland Open Access. This article is distributed under the terms of the Creative Commons Attribution Noncommercial License which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author (s) and source are credited. This is an open access article licensed under the terms of the Creative Commons Attribution Non commercial license Share alike. (http://creativecommons.org/licenses/by-nc-sa/4.0/) which permits unrestricted, non commercial use, distribution and reproduction in any medium, provided the work is properly cited. The authors declare that there is no conflict of interests regarding the publication of this paper. Received: 02.08.2022. Revised: 07.08.2022. Accepted: 26.08.2022. Monkeypox in humans – the review Konrad Warchoł (1); https://orcid.org/0000-0001-9467-680X; konrad.wrh@gmail.com Adam Jasiura (2); https://orcid.org/0000-0002-4648-0981; adam.jasiura@student.umw.edu.pl Sylwiusz Niedobylski (1); https://orcid.org/0000-0001-7266-623X; sniedobylski@gmail.com Aleksandra Wójcik (1); https://orcid.org/0000-0003-1669-7466; awojcik115@gmail.com Kamila Giżewska (1); https://orcid.org/0000-0003-1682-180X; gizewska.kamila@gmail.com Affiliation: 1 – Medical University of Lublin 2 – Wroclaw Medical University Abstract Monkeypox is an emerging zoonotic disease caused by the monkeypox virus with a presentation similar to smallpox. Being previously endemic to Africa, now the disease is spreading across the world, causing fear of a potential next pandemic. Smallpox vaccine, previously providing cross-immunity to monkeypox virus, due to cessation of vaccinations, caused the decline in immunity against these viruses. Defined ways of transmission are animal-to-human through consumption or attack by an affected animal, human-to-human through close contact, or via respiratory droplets. Currently, there are no specific antiviral drugs and vaccine specific to monkeypox, and for symptomatic care, there are no determined guidelines. Keywords: monkeypox, virus, pandemic

Kuchnicka Aleksandra Amalia, Kosz Katarzyna, Kuchnicka Julia, Remjasz Klaudia, Zarankiewicz Natalia, Zielińska Martyna, Sapuła Klaudia, Aleksandrowicz Jakub, Siedlecki Wojciech. Monkeypox - review. Journal of Education, Health and Sport. 2022;12(8):996-1001. eISSN 2391-8306. DOI http://dx.doi.org/10.12775/JEHS.2022.12.08.083 https://apcz.umk.pl/JEHS/article/view/JEHS.2022.12.08.083 https://zenodo.org/record/7019171 The journal has had 40 points in Ministry of Education and Science of Poland parametric evaluation. Annex to the announcement of the Minister of Education and Science of December 21, 2021. No. 32343. Has a Journal's Unique Identifier: 201159. Scientific disciplines assigned: Physical Culture Sciences (Field of Medical sciences and health sciences); Health Sciences (Field of Medical Sciences and Health Sciences). Punkty Ministerialne z 2019 - aktualny rok 40 punktów. Załącznik do komunikatu Ministra Edukacji i Nauki z dnia 21 grudnia 2021 r. Lp. 32343. Posiada Unikatowy Identyfikator Czasopisma: 201159. Przypisane dyscypliny naukowe: Nauki o kulturze fizycznej (Dziedzina nauk medycznych i nauk o zdrowiu); Nauki o zdrowiu (Dziedzina nauk medycznych i nauk o zdrowiu). © The Authors 2022; This article is published with open access at Licensee Open Journal Systems of Nicolaus Copernicus University in Torun, Poland Open Access. This article is distributed under the terms of the Creative Commons Attribution Noncommercial License which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author (s) and source are credited. This is an open access article licensed under the terms of the Creative Commons Attribution Non commercial license Share alike. (http://creativecommons.org/licenses/by-nc-sa/4.0/) which permits unrestricted, non commercial use, distribution and reproduction in any medium, provided the work is properly cited. The authors declare that there is no conflict of interests regarding the publication of this paper. Received: 02.08.2022. Revised: 07.08.2022. Accepted: 24.08.2022. Monkeypox - review Aleksandra Amalia Kuchnicka https://orcid.org/0000-0001-8481-7592 Katarzyna Kosz Samodzielny Publiczny Szpital Kliniczny Nr 4 w Lublinie https://orcid.org/0000-0001-6848-0598 Julia Kuchnicka Szpital Specjalistyczny w Brzezinach https://orcid.org/0000-0003-0409-5695 Klaudia Remjasz Absolwent Uniwersytetu Medycznego w Warszawie https://orcid.org/0000-0002-0879-7515 Natalia Zarankiewicz Samodzielny Publiczny Szpital Kliniczny Nr 4 w Lublinie https://orcid.org/0000-0001-9203-3376 Martyna Zielińska Samodzielny Publiczny Szpital Kliniczny Nr 4 w Lublinie https://orcid.org/0000-0001-8886-8274 Klaudia Sapuła Samodzielny Publiczny Szpital Kliniczny Nr 4 w Lublinie https://orcid.org/0000-0003-2436-0150 Jakub Aleksandrowicz Samodzielny Publiczny Szpital Kliniczny Nr 4 w Lublinie https://orcid.org/0000-0002-4534-9682 Wojciech Siedlecki 1 Wojskowy Szpital Kliniczny w Lublinie https://orcid.org/0000-0002-9917-5411 Abstract Introduction and purpose: This review aims to analyze the current information about monkeypox and the virus which causes the disease. Material and method: This review was based on articles collected in PubMed and published in the years 2012-2022 The research was done by looking through keywords as follows: „monkeypox”; „zoonosis”;„tecovirimat” Results: The selected studies have demonstrated that the monkeypox virus is a high-danger pathogen that causes a disease important to public health. More research on this topic has to be done to prevent and better comprehend the potential threat. Conclusions: According to the cited research, public health systems should be aware of practical methods to reduce the risk of monkeypox spreading. It is crucial to monitor the spreading of the monkeypox disease and create effective preparation. Moreover, governments should develop strategies to prevent their population. Keywords: monkeypox; emerging infectious diseases; orthopoxvirus; zoonosis

Code and data for the paper: "Monkeypox in Latin America and the Caribbean: First response and challenge ahead after the first 100 days of the 2022 outbreak" (Paper authors: Antonio Quispe & Jesus M. Castagnetto) This release contains the code in R and the data used to generate the figures and table, using as sources the data from UN World Population Prospects, the World Bank country classification and the Monkeypox data from the Global Health Data Science Inititative (data donwloaded on 2022-08-23) Analysis, figures and table consider data from non-endemic countries from epidemiological week 2022W20 to 2022W33 (inclusive)

Code and data for the paper: "Monkeypox in Latin America and the Caribbean: first response and challenge ahead after the first 12 weeks of the 2022 outbreak"